@prefix this: . @prefix sub: . @prefix np: . @prefix dct: . @prefix rdf: . @prefix nt: . @prefix npx: . @prefix xsd: . @prefix rdfs: . @prefix orcid: . @prefix prov: . sub:Head { this: np:hasAssertion sub:assertion; np:hasProvenance sub:provenance; np:hasPublicationInfo sub:pubinfo; a np:Nanopublication . } sub:assertion { rdfs:label "refers to the life cycle stage (of organisms of the given taxon)" . rdfs:label "has habitat" . sub:assertion dct:description """

This just a preliminary template for testing...

It uses Biolink for the overall structure.

The subject is a taxon as extracted from Checklistbank.

The life cyle stage is from Uberon.

The predicate is from the Relation Ontology.

The object is a habitat according to the ENVO ontology.

"""; a nt:AssertionTemplate; rdfs:label "Linking a taxon to a habitat (Biolink/nidx/Uberon/RO/Checklistbank version)"; nt:hasStatement sub:st0, sub:st1, sub:st2, sub:st3, sub:st4; nt:hasTag "Biodiversity" . sub:association a nt:IntroducedResource, nt:LocalResource; rdfs:label "this association" . sub:habitat a nt:GuidedChoicePlaceholder; rdfs:label "habitat/environment related to taxon"; nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=envo&fieldList=iri,label,description&q=" . sub:lifecyclestage a nt:GuidedChoicePlaceholder; rdfs:label "identifier of the life cycle stage"; nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=uberon&fieldList=iri,label,description&childrenOf=http://purl.obolibrary.org/obo/UBERON_0000105&q=" . sub:relation a nt:GuidedChoicePlaceholder; rdfs:label "identifier of relation"; nt:possibleValue ; nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" . sub:st0 rdf:object ; rdf:predicate rdf:type; rdf:subject sub:association . sub:st1 rdf:object sub:taxon; rdf:predicate ; rdf:subject sub:association . sub:st2 rdf:object sub:lifecyclestage; rdf:predicate ; rdf:subject sub:association; a nt:OptionalStatement . sub:st3 rdf:object sub:relation; rdf:predicate ; rdf:subject sub:association . sub:st4 rdf:object sub:habitat; rdf:predicate ; rdf:subject sub:association . sub:taxon a nt:GuidedChoicePlaceholder; rdfs:label "identifier of taxon"; nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" . rdf:type rdfs:label "is a" . rdfs:label "association of an organism taxon to an environment" . rdfs:label "refers to the environment" . rdfs:label "refers to the relation (between taxon and environment)" . rdfs:label "refers to the organism taxon" . } sub:provenance { sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 . } sub:pubinfo { sub:sig npx:hasAlgorithm "RSA"; npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB"; npx:hasSignature "Rws17d/tmXt4X8ETESlHPeQb3ynaE9B+fvcr8qQrPmydPJu0giPopm9V0QEap4dkCZMJXMy03sE7MN5I92/dfA+4T+VUraTNNtwyxeVHEvqHDwri/2gIvsVxRt3kv0h9rqX2mePjAoodk2BvdvNgynEIn0p+OgZEzeReTYfMVx4="; npx:hasSignatureTarget this: . this: dct:created "2023-04-25T13:57:57.316Z"^^xsd:dateTime; dct:creator orcid:0000-0002-1267-0234; npx:supersedes ; nt:wasCreatedFromProvenanceTemplate ; nt:wasCreatedFromPubinfoTemplate , ; nt:wasCreatedFromTemplate . }